WormBase Tree Display for CDS: F56G4.3
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| F56G4.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F56G4 | |||
| Structure | Source_exons | 1 | 74 | |||
| 138 | 959 | |||||
| 1036 | 1135 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | G5ECQ5 | ||
| UniProt | UniProtAcc | G5ECQ5 | ||||
| UniProt_GCRP | UniProtAcc | G5ECQ5 | ||||
| AlphaFold | entry | G5ECQ5 | ||||
| NCBI_protein | GI_number | GI:3877757 | ||||
| TREEFAM | TREEFAM_ID | TF319902 | ||||
| Protein_id | CHROMOSOME_I | CAB04485 | 1 | |||
| DB_remark | PES-2.2 protein; contains similarity to Pfam domain PF07735 (F-box associated); contains similarity to Interpro domain IPR012885 (F-box associated domain, type 2) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00010158 | ||||
| Corresponding_transcript | F56G4.3.1 | |||||
| Corresponding_protein | CE18757 | |||||
| Corresponding_PCR_product | cenix:197-a10_1 | |||||
| cenix:197-b10_1 | ||||||
| mv_CAA64362_1 | ||||||
| mv_F56G4.3_1 | ||||||
| sjj_F56G4.3 | ||||||
| smd_F56G4.3 | ||||||
| Corresponding_oligo_set | 18456973 | |||||
| 18470761 | ||||||
| Aff_F56G4.2 | ||||||
| Matching_cDNA | EM_Nanopore_Li_301874 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00063223 | |||||
| WBRNAi00003819 | ||||||
| WBRNAi00076492 | ||||||
| WBRNAi00003818 | ||||||
| WBRNAi00063224 | ||||||
| WBRNAi00048761 | ||||||
| WBRNAi00007548 | ||||||
| WBRNAi00048762 | ||||||
| WBRNAi00007564 | ||||||
| Microarray_results | SMD_F56G4.3 | |||||
| Aff_F56G4.2 | ||||||
| Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:G5ECQ5 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
