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WormBase Tree Display for CDS: F52E4.7

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Name Class

F52E4.7EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF52E4
StructureSource_exons (13)
DB_infoDatabaseSwissProtUniProtAccQ20678
UniProtUniProtAccQ20678
UniProt_GCRPUniProtAccQ20678
AlphaFoldentryQ20678
NCBI_proteinGI_numberGI:373219217
TREEFAMTREEFAM_IDTF314195
Protein_idCHROMOSOME_XCCD664821
DB_remarkSEC-3 protein; contains similarity to Pfam domains PF09763 (Exocyst complex component Sec3, coiled-coil), PF15277 (Exocyst complex component SEC3 N-terminal PIP2 binding PH), PF20654 (Exocyst complex component Sec3, C-terminal); contains similarity to Interpro domains IPR019160 (Exocyst complex component Sec3, coiled-coil), IPR028258 (Exocyst complex component Sec3, PIP2-binding N-terminal domain), IPR048628 (Exocyst complex component Sec3, C-terminal)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00018703
Corresponding_transcriptF52E4.7.1
Corresponding_proteinCE10836
Corresponding_PCR_productcenix:69-g10
mv_F52E4.7
sjj_F52E4.7
Corresponding_oligo_set (16)
Matching_cDNA (44)
RNAi_resultWBRNAi00081463
WBRNAi00032626
WBRNAi00025571
WBRNAi00002382
WBRNAi00111792
WBRNAi00008829
WBRNAi00081455
WBRNAi00048000
WBRNAi00080625
Microarray_results (18)
Brief_identificationExocyst complex component 1Accession_evidenceUniProtSP:Q20678
RNASeq_FPKM (74)
Methodcurated