WormBase Tree Display for CDS: F52E4.7
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F52E4.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F52E4 | |||
Structure | Source_exons (13) | |||||
DB_info | Database | SwissProt | UniProtAcc | Q20678 | ||
UniProt | UniProtAcc | Q20678 | ||||
UniProt_GCRP | UniProtAcc | Q20678 | ||||
AlphaFold | entry | Q20678 | ||||
NCBI_protein | GI_number | GI:373219217 | ||||
TREEFAM | TREEFAM_ID | TF314195 | ||||
Protein_id | CHROMOSOME_X | CCD66482 | 1 | |||
DB_remark | SEC-3 protein; contains similarity to Pfam domains PF09763 (Exocyst complex component Sec3, coiled-coil), PF15277 (Exocyst complex component SEC3 N-terminal PIP2 binding PH), PF20654 (Exocyst complex component Sec3, C-terminal); contains similarity to Interpro domains IPR019160 (Exocyst complex component Sec3, coiled-coil), IPR028258 (Exocyst complex component Sec3, PIP2-binding N-terminal domain), IPR048628 (Exocyst complex component Sec3, C-terminal) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00018703 | ||||
Corresponding_transcript | F52E4.7.1 | |||||
Corresponding_protein | CE10836 | |||||
Corresponding_PCR_product | cenix:69-g10 | |||||
mv_F52E4.7 | ||||||
sjj_F52E4.7 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (44) | ||||||
RNAi_result | WBRNAi00081463 | |||||
WBRNAi00032626 | ||||||
WBRNAi00025571 | ||||||
WBRNAi00002382 | ||||||
WBRNAi00111792 | ||||||
WBRNAi00008829 | ||||||
WBRNAi00081455 | ||||||
WBRNAi00048000 | ||||||
WBRNAi00080625 | ||||||
Microarray_results (18) | ||||||
Brief_identification | Exocyst complex component 1 | Accession_evidence | UniProt | SP:Q20678 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |