WormBase Tree Display for CDS: F45E6.4
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| F45E6.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F45E6 | |||
| Structure | Source_exons | 1 | 101 | |||
| 685 | 775 | |||||
| 1465 | 1646 | |||||
| 1698 | 1836 | |||||
| 1892 | 2029 | |||||
| 2154 | 2313 | |||||
| 2506 | 2582 | |||||
| 2640 | 2753 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q20437 | ||
| UniProt | UniProtAcc | Q20437 | ||||
| UniProt_GCRP | UniProtAcc | Q20437 | ||||
| AlphaFold | entry | Q20437 | ||||
| NCBI_protein | GI_number | GI:3877189 | ||||
| TREEFAM | TREEFAM_ID | TF316108 | ||||
| Protein_id | CHROMOSOME_X | CAA92178 | 1 | |||
| DB_remark | LIPS-1 protein; contains similarity to Pfam domain PF01674 (Lipase (class 2)); contains similarity to Interpro domains IPR029058 (Alpha/Beta hydrolase fold), IPR002918 (Lipase EstA/Esterase EstB) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00009727 | ||||
| Corresponding_transcript | F45E6.4.1 | |||||
| Corresponding_protein | CE03339 | |||||
| Corresponding_PCR_product | cenix:96-c6 | |||||
| mv_F45E6.4 | ||||||
| sjj_F45E6.4 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | L2_Nanopore_Roach_4124 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Roach_3733 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_12652 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_11803 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_64842 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_12801 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR211A6_1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG4701|c2_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_8012 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00047418 | |||||
| WBRNAi00015030 | ||||||
| WBRNAi00032312 | ||||||
| WBRNAi00102869 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | Lipase | Accession_evidence | UniProt | TR:Q20437 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
