WormBase Tree Display for CDS: F44E2.6b
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F44E2.6b | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F44E2 | |||
Structure | Source_exons | 1 | 115 | |||
162 | 249 | |||||
302 | 431 | |||||
474 | 578 | |||||
DB_info | Database | KEGG | KEGG_id | 1.8.4.12 | ||
TrEMBL | UniProtAcc | Q1W0S5 | ||||
UniProt | UniProtAcc | Q1W0S5 | ||||
AlphaFold | entry | Q1W0S5 | ||||
NCBI_protein | GI_number | GI:373219908 | ||||
Protein_id | CHROMOSOME_III | CCD71224 | 1 | |||
DB_remark | contains similarity to Pfam domain PF01641 (SelR domain); contains similarity to Interpro domains IPR002579 (Peptide methionine sulphoxide reductase MrsB domain), IPR028427 (Peptide methionine sulfoxide reductase MsrB), IPR011057 (Mss4-like superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Feature_evidence | WBsf021290 | ||||
WBsf017247 | ||||||
Visible | Gene | WBGene00018419 | ||||
Corresponding_transcript | F44E2.6b.1 | |||||
Corresponding_protein | CE40061 | |||||
Corresponding_PCR_product | TH:309F4 | |||||
cenix:309-f4 | ||||||
mv_F44E2.6 | ||||||
sjj2_F44E2.6 | ||||||
sjj_F44E2.6 | ||||||
Corresponding_oligo_set (20) | ||||||
Matching_cDNA | young_adult_Nanopore_Roach_26858 | |||||
young_adult_Nanopore_Roach_37841 | ||||||
L1_Nanopore_Roach_57411 | ||||||
L1_Nanopore_Roach_61250 | ||||||
L1_Nanopore_Roach_32241 | ||||||
L4_Nanopore_Roach_21170 | ||||||
elegans_PE_SS_GG2367|c0_g1_i2 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00032242 | |||||
WBRNAi00047288 | ||||||
WBRNAi00005700 | ||||||
Microarray_results (24) | ||||||
Brief_identification | Peptide-methionine (R)-S-oxide reductase | Accession_evidence | UniProt | TR:Q1W0S5 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf017247 | |||||
Method | curated |