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WormBase Tree Display for CDS: F44E2.6b

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Name Class

F44E2.6bEvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF44E2
StructureSource_exons1115
162249
302431
474578
DB_infoDatabaseKEGGKEGG_id1.8.4.12
TrEMBLUniProtAccQ1W0S5
UniProtUniProtAccQ1W0S5
AlphaFoldentryQ1W0S5
NCBI_proteinGI_numberGI:373219908
Protein_idCHROMOSOME_IIICCD712241
DB_remarkcontains similarity to Pfam domain PF01641 (SelR domain); contains similarity to Interpro domains IPR002579 (Peptide methionine sulphoxide reductase MrsB domain), IPR028427 (Peptide methionine sulfoxide reductase MsrB), IPR011057 (Mss4-like superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
IsoformFeature_evidenceWBsf021290
WBsf017247
VisibleGeneWBGene00018419
Corresponding_transcriptF44E2.6b.1
Corresponding_proteinCE40061
Corresponding_PCR_productTH:309F4
cenix:309-f4
mv_F44E2.6
sjj2_F44E2.6
sjj_F44E2.6
Corresponding_oligo_set (20)
Matching_cDNAyoung_adult_Nanopore_Roach_26858
young_adult_Nanopore_Roach_37841
L1_Nanopore_Roach_57411
L1_Nanopore_Roach_61250
L1_Nanopore_Roach_32241
L4_Nanopore_Roach_21170
elegans_PE_SS_GG2367|c0_g1_i2Inferred_automaticallytranscript_builder.pl
RNAi_resultWBRNAi00032242
WBRNAi00047288
WBRNAi00005700
Microarray_results (24)
Brief_identificationPeptide-methionine (R)-S-oxide reductaseAccession_evidenceUniProtTR:Q1W0S5
RNASeq_FPKM (74)
Associated_featureWBsf017247
Methodcurated