WormBase Tree Display for CDS: F38E1.3
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| F38E1.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F38E1 | |||
| Structure | Source_exons | 1 | 42 | |||
| 87 | 251 | |||||
| 443 | 595 | |||||
| 708 | 845 | |||||
| 904 | 1170 | |||||
| 1481 | 1597 | |||||
| 1648 | 1698 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q20160 | ||
| UniProt | UniProtAcc | Q20160 | ||||
| UniProt_GCRP | UniProtAcc | Q20160 | ||||
| AlphaFold | entry | Q20160 | ||||
| NCBI_protein | GI_number | GI:351021364 | ||||
| Protein_id | CHROMOSOME_V | CCD63656 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00018178 | ||||
| Corresponding_transcript | F38E1.3.1 | |||||
| Corresponding_protein | CE04522 | |||||
| Corresponding_PCR_product | cenix:44-d10 | |||||
| mv_F38E1.3 | ||||||
| sjj_F38E1.3 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | male_Nanopore_Roach_125615 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_125881 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_48323 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR194D10_1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_58052 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_56774 | Inferred_automatically | transcript_builder.pl | ||||
| yk203e3.5 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG5927|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_155320 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF194D10_1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00031962 | |||||
| WBRNAi00014562 | ||||||
| WBRNAi00046708 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Protein kinase domain-containing protein | Accession_evidence | UniProt | TR:Q20160 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
