WormBase Tree Display for CDS: F28C1.2b
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F28C1.2b | SMap | S_parent | Sequence | F28C1 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 20 | ||
2630 | 2835 | ||||
2886 | 3044 | ||||
3306 | 3447 | ||||
4714 | 5115 | ||||
5170 | 5322 | ||||
5368 | 5502 | ||||
5557 | 5875 | ||||
6227 | 6319 | ||||
6799 | 7089 | ||||
DB_info | Database | TrEMBL | UniProtAcc | F5GUC9 | |
UniProt | UniProtAcc | F5GUC9 | |||
AlphaFold | entry | F5GUC9 | |||
NCBI_protein | GI_number | GI:332078363 | |||
TREEFAM | TREEFAM_ID | TF351956 | |||
Protein_id | CHROMOSOME_V | CCA65559 | 1 | ||
DB_remark | EGL-10 protein; contains similarity to Pfam domains PF00610 (Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)), PF00615 (Regulator of G protein signaling domain), PF00631 (GGL domain), PF18148 (Regulator of G-protein signalling DHEX domain); contains similarity to Interpro domains IPR036305 (RGS domain superfamily), IPR044926 (RGS, subdomain 2), IPR047017 (Regulator of G-protein signalling 6/7/9/11, DHEX domain superfamily), IPR036284 (G-protein gamma-like domain superfamily), IPR040759 (Regulator of G-protein signalling, DHEX domain), IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR047016 (Regulator of G protein signaling 6/7/9/11), IPR016137 (RGS domain), IPR015898 (G-protein gamma-like domain), IPR000591 (DEP domain) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | From_analysis | RNASeq_Hillier_elegans | |||
Visible (11) | |||||
Method | curated |