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WormBase Tree Display for CDS: F28B3.6

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Name Class

F28B3.6EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF28B3
StructureSource_exons135
98301
351476
528666
DB_infoDatabaseTrEMBLUniProtAccQ86NJ0
UniProtUniProtAccQ86NJ0
UniProt_GCRPUniProtAccQ86NJ0
AlphaFoldentryQ86NJ0
NCBI_proteinGI_numberGI:351061951
TREEFAMTREEFAM_IDTF318893
Protein_idCHROMOSOME_ICCD698251
DB_remarkcontains similarity to Pfam domain PF08560 (Protein of unknown function (DUF1757)); contains similarity to Interpro domain IPR013869 (Protein of unknown function DUF1757)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00017887
Corresponding_transcriptF28B3.6.1
Corresponding_proteinCE33384
Corresponding_PCR_productcenix:174-h10
cenix:85-d10
mv_F28B3.6
sjj2_F28B3.6.1
sjj_F28B3.6
Corresponding_oligo_set (19)
Matching_cDNA (52)
RNAi_resultWBRNAi00045790
WBRNAi00045785
Microarray_results (20)
RNASeq_FPKM (74)
Remarkthis isoform is based on EMBL accession BJ772837
previously F28B3.6b
Associated_featureWBsf017148
Methodcurated