WormBase Tree Display for CDS: F25E2.4
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| F25E2.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F25E2 | |||
| Structure | Source_exons | 1 | 216 | |||
| 439 | 552 | |||||
| 596 | 693 | |||||
| 744 | 828 | |||||
| 969 | 1445 | |||||
| 1494 | 1658 | |||||
| 1719 | 1895 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q19782 | ||
| UniProt | UniProtAcc | Q19782 | ||||
| UniProt_GCRP | UniProtAcc | Q19782 | ||||
| AlphaFold | entry | Q19782 | ||||
| NCBI_protein | GI_number | GI:373219765 | ||||
| TREEFAM | TREEFAM_ID | TF101181 | ||||
| Protein_id | CHROMOSOME_X | CCD69985 | 1 | |||
| DB_remark | IFD-2 protein; contains similarity to Pfam domain PF00038 (Intermediate filament protein); contains similarity to Interpro domain IPR039008 (Intermediate filament, rod domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00002058 | ||||
| Corresponding_transcript | F25E2.4.1 | |||||
| Corresponding_protein | CE07133 | |||||
| Corresponding_PCR_product | [cgc4761]:D2 | |||||
| cenix:243-b5 | ||||||
| mv_F25E2.4 | ||||||
| sjj_F25E2.4 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA (43) | ||||||
| RNAi_result | WBRNAi00062660 | |||||
| WBRNAi00013868 | ||||||
| WBRNAi00062655 | ||||||
| WBRNAi00112379 | ||||||
| WBRNAi00045498 | ||||||
| WBRNAi00031370 | ||||||
| WBRNAi00062656 | ||||||
| WBRNAi00007223 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | Intermediate filament protein ifd-2 | Accession_evidence | UniProt | SP:Q19782 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf003210 | |||||
| Method | curated |
