WormBase Tree Display for CDS: F25B3.3b
expand all nodes | collapse all nodes | view schema
| F25B3.3b | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F25B3 | ||
| Structure | Source_exons (11) | ||||
| DB_info | Database | TrEMBL | UniProtAcc | K8FDZ6 | |
| UniProt | UniProtAcc | K8FDZ6 | |||
| AlphaFold | entry | K8FDZ6 | |||
| NCBI_protein | GI_number | GI:423146302 | |||
| Protein_id | CHROMOSOME_V | CCO25649 | 1 | ||
| DB_remark | RGEF-1 protein; contains similarity to Pfam domains PF00130 (Phorbol esters/diacylglycerol binding domain (C1 domain)), PF00617 (RasGEF domain), PF13499 (EF-hand domain pair); contains similarity to Interpro domains IPR002048 (EF-hand domain), IPR020454 (Diacylglycerol/phorbol-ester binding), IPR001895 (Ras guanine-nucleotide exchange factors catalytic domain), IPR046349 (C1-like domain superfamily), IPR008937 (Ras-like guanine nucleotide exchange factor), IPR011992 (EF-hand domain pair), IPR023578 (Ras guanine nucleotide exchange factor domain superfamily), IPR002219 (Protein kinase C-like, phorbol ester/diacylglycerol-binding domain), IPR036964 (Ras guanine-nucleotide exchange factor, catalytic domain superfamily) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Partially_confirmed | ||||
| Isoform | From_analysis | RNASeq_Hillier_elegans | |||
| Visible (12) | |||||
| Method | curated |
