WormBase Tree Display for CDS: F20H11.5
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| F20H11.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F20H11 | |||
| Structure | Source_exons | 1 | 43 | |||
| 88 | 188 | |||||
| 234 | 844 | |||||
| 893 | 1013 | |||||
| 1057 | 1158 | |||||
| 1204 | 1377 | |||||
| DB_info | Database | KEGG | KEGG_id | 1.4.3.1 | ||
| SwissProt | UniProtAcc | O01739 | ||||
| UniProt | UniProtAcc | O01739 | ||||
| UniProt_GCRP | UniProtAcc | O01739 | ||||
| AlphaFold | entry | O01739 | ||||
| NCBI_protein | GI_number | GI:351061904 | ||||
| TREEFAM | TREEFAM_ID | TF313887 | ||||
| Protein_id | CHROMOSOME_III | CCD69778 | 1 | |||
| DB_remark | DDO-3 protein; contains similarity to Pfam domain PF01266 (FAD dependent oxidoreductase); contains similarity to Interpro domains IPR006076 (FAD dependent oxidoreductase), IPR023209 (D-amino-acid oxidase) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00017648 | ||||
| Corresponding_transcript | F20H11.5.1 | |||||
| Corresponding_protein | CE09514 | |||||
| Corresponding_PCR_product | TH:327F1 | |||||
| cenix:304-e9 | ||||||
| cenix:327-f1 | ||||||
| mv_F20H11.5 | ||||||
| sjj_F20H11.5 | ||||||
| sjj_F27B3.5 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (46) | ||||||
| RNAi_result | WBRNAi00031191 | |||||
| WBRNAi00045144 | ||||||
| WBRNAi00013989 | ||||||
| WBRNAi00013647 | ||||||
| WBRNAi00006550 | ||||||
| WBRNAi00045150 | ||||||
| Microarray_results (21) | ||||||
| Brief_identification | D-aspartate oxidase 3 | Accession_evidence | UniProt | SP:O01739 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
