WormBase Tree Display for CDS: F15A4.6
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F15A4.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F15A4 | |||
Structure | Source_exons | 1 | 85 | |||
157 | 354 | |||||
998 | 1097 | |||||
1145 | 1193 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O17815 | ||
UniProt | UniProtAcc | O17815 | ||||
UniProt_GCRP | UniProtAcc | O17815 | ||||
AlphaFold | entry | O17815 | ||||
NCBI_protein | GI_number | GI:3875976 | ||||
TREEFAM | TREEFAM_ID | TF318899 | ||||
Protein_id | CHROMOSOME_II | CAB02944 | 1 | |||
DB_remark | PHAT-8 protein; contains similarity to Pfam domains PF01549 (ShK domain-like), PF04942 (CC domain); contains similarity to Interpro domains IPR003582 (ShKT domain), IPR007026 (CC domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00008841 | ||||
Corresponding_transcript | F15A4.6.1 | |||||
Corresponding_protein | CE15843 | |||||
Corresponding_PCR_product | cenix:210-a3 | |||||
mv_F15A4.6 | ||||||
sjj_F15A4.6 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (33) | ||||||
RNAi_result | WBRNAi00044682 | |||||
WBRNAi00030987 | ||||||
WBRNAi00013345 | ||||||
Microarray_results (17) | ||||||
Brief_identification | ShKT domain-containing protein | Accession_evidence | UniProt | TR:O17815 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |