WormBase Tree Display for CDS: F09E5.3
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| F09E5.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F09E5 | |||
| Structure | Source_exons | 1 | 162 | |||
| 223 | 888 | |||||
| 935 | 1018 | |||||
| DB_info | Database | KEGG | KEGG_id | 4.1.2.4 | ||
| SwissProt | UniProtAcc | Q19264 | ||||
| UniProt | UniProtAcc | Q19264 | ||||
| UniProt_GCRP | UniProtAcc | Q19264 | ||||
| AlphaFold | entry | Q19264 | ||||
| NCBI_protein | GI_number | GI:351061011 | ||||
| TREEFAM | TREEFAM_ID | TF314251 | ||||
| Protein_id | CHROMOSOME_II | CCD68756 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01791 (DeoC/LacD family aldolase); contains similarity to Interpro domains IPR013785 (Aldolase-type TIM barrel), IPR002915 (DeoC/FbaB/LacD aldolase), IPR011343 (Deoxyribose-phosphate aldolase) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00017283 | ||||
| Corresponding_transcript | F09E5.3.1 | |||||
| Corresponding_protein | CE02610 | |||||
| Corresponding_PCR_product | cenix:204-e2 | |||||
| mv_G_YK8624 | ||||||
| sjj_F09E5.3 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (47) | ||||||
| RNAi_result | WBRNAi00044128 | |||||
| WBRNAi00012977 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Putative deoxyribose-phosphate aldolase | Accession_evidence | UniProt | SP:Q19264 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf008698 | |||||
| WBsf017192 | ||||||
| Method | curated |
