WormBase Tree Display for CDS: F08F1.9
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| F08F1.9 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F08F1 | |||
| Structure | Source_exons | 1 | 167 | |||
| 221 | 371 | |||||
| 453 | 527 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | O17384 | ||
| UniProt | UniProtAcc | O17384 | ||||
| UniProt_GCRP | UniProtAcc | O17384 | ||||
| AlphaFold | entry | O17384 | ||||
| NCBI_protein | GI_number | GI:351061258 | ||||
| TREEFAM | TREEFAM_ID | TF322999 | ||||
| Protein_id | CHROMOSOME_X | CCD69032 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00134 (Cyclin, N-terminal domain); contains similarity to Interpro domains IPR006671 (Cyclin, N-terminal), IPR039361 (Cyclin), IPR013763 (Cyclin-like domain), IPR036915 (Cyclin-like superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00017259 | ||||
| Corresponding_transcript | F08F1.9.1 | |||||
| Corresponding_protein | CE09256 | |||||
| Corresponding_PCR_product | cenix:219-c10_2 | |||||
| mv_F08F1.9 | ||||||
| sjj_F08F1.9 | ||||||
| Corresponding_oligo_set | 172428_x_at | |||||
| A_12_P137547 | ||||||
| Aff_F08F1.9 | ||||||
| GPL14144_F08F1.9_77-136_0.941_1_A | ||||||
| GPL19516_CGZ0014903 | ||||||
| GPL21109_F08F1.9 | ||||||
| GPL3518_CE09256 | ||||||
| GPL8673_F08F1_9P00031 | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_19972 | Inferred_automatically | transcript_builder.pl | |||
| EM_Nanopore_Li_161501 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00039585 | |||||
| WBRNAi00008163 | ||||||
| WBRNAi00012903 | ||||||
| WBRNAi00044014 | ||||||
| WBRNAi00016155 | ||||||
| WBRNAi00007665 | ||||||
| WBRNAi00019116 | ||||||
| WBRNAi00018379 | ||||||
| WBRNAi00010101 | ||||||
| Microarray_results | SMD_F08F1.9 | |||||
| 172428_x_at | ||||||
| A_12_P137547 | ||||||
| Aff_F08F1.9 | ||||||
| GPL14144_F08F1.9_77-136_0.941_1_A | ||||||
| GPL19516_CGZ0014903 | ||||||
| GPL21109_F08F1.9 | ||||||
| GPL3518_CE09256 | ||||||
| GPL8673_F08F1_9P00031 | ||||||
| Brief_identification | Cyclin-like domain-containing protein | Accession_evidence | UniProt | TR:O17384 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
