WormBase Tree Display for CDS: F07C4.6
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| F07C4.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F07C4 | |||
| Structure | Source_exons | 1 | 99 | |||
| 308 | 569 | |||||
| 618 | 871 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | P91208 | ||
| UniProt | UniProtAcc | P91208 | ||||
| UniProt_GCRP | UniProtAcc | P91208 | ||||
| AlphaFold | entry | P91208 | ||||
| NCBI_protein | GI_number | GI:351050158 | ||||
| TREEFAM | TREEFAM_ID | TF317956 | ||||
| Protein_id | CHROMOSOME_V | CCD64295 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01549 (ShK domain-like); contains similarity to Interpro domain IPR003582 (ShKT domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00017200 | ||||
| Corresponding_transcript | F07C4.6.1 | |||||
| Corresponding_protein | CE09205 | |||||
| Corresponding_PCR_product | cenix:127-a7 | |||||
| cenix:51-a4 | ||||||
| mv_F07C4.6 | ||||||
| sjj_F07C4.6 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA | male_Nanopore_Roach_106444 | Inferred_automatically | transcript_builder.pl | |||
| L3_Nanopore_Roach_63119 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_67117 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF162D7_1 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR162D7_1 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_264641 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG5809|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00012818 | |||||
| WBRNAi00043893 | ||||||
| WBRNAi00030603 | ||||||
| WBRNAi00043894 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | ShKT domain-containing protein | Accession_evidence | UniProt | TR:P91208 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
