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WormBase Tree Display for CDS: E02H1.2

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Name Class

E02H1.2EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCHROMOSOME_II
StructureSource_exons169
118258
324641
6921042
10991404
DB_infoDatabaseSwissProtUniProtAccQ09523
UniProtUniProtAccQ09523
UniProt_GCRPUniProtAccQ09523
AlphaFoldentryQ09523
NCBI_proteinGI_numberGI:3875434
TREEFAMTREEFAM_IDTF321650
Protein_idCHROMOSOME_IICAA873841
DB_remarkERAL-1 protein; contains similarity to Pfam domain PF01926 (50S ribosome-binding GTPase); contains similarity to Interpro domains IPR009019 (K homology domain superfamily, prokaryotic type), IPR005662 (GTPase Era), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR006073 (GTP binding domain), IPR005225 (Small GTP-binding protein domain), IPR015946 (K homology domain-like, alpha/beta)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00008456
Corresponding_transcriptE02H1.2.1
Corresponding_proteinCE01537
Corresponding_PCR_productcenix:59-h8
mv_E02H1.2
sjj_E02H1.2
smd_E02H1.2:2
Corresponding_oligo_set (16)
Matching_cDNA (55)
RNAi_resultWBRNAi00043598
WBRNAi00030464
WBRNAi00062184
WBRNAi00012642
Microarray_results (18)
Brief_identificationGTPase Era, mitochondrialAccession_evidenceUniProtSP:Q09523
RNASeq_FPKM (74)
Associated_featureWBsf979651
Methodcurated