WormBase Tree Display for CDS: E02H1.2
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E02H1.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_II | |||
Structure | Source_exons | 1 | 69 | |||
118 | 258 | |||||
324 | 641 | |||||
692 | 1042 | |||||
1099 | 1404 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q09523 | ||
UniProt | UniProtAcc | Q09523 | ||||
UniProt_GCRP | UniProtAcc | Q09523 | ||||
AlphaFold | entry | Q09523 | ||||
NCBI_protein | GI_number | GI:3875434 | ||||
TREEFAM | TREEFAM_ID | TF321650 | ||||
Protein_id | CHROMOSOME_II | CAA87384 | 1 | |||
DB_remark | ERAL-1 protein; contains similarity to Pfam domain PF01926 (50S ribosome-binding GTPase); contains similarity to Interpro domains IPR009019 (K homology domain superfamily, prokaryotic type), IPR005662 (GTPase Era), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR006073 (GTP binding domain), IPR005225 (Small GTP-binding protein domain), IPR015946 (K homology domain-like, alpha/beta) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00008456 | ||||
Corresponding_transcript | E02H1.2.1 | |||||
Corresponding_protein | CE01537 | |||||
Corresponding_PCR_product | cenix:59-h8 | |||||
mv_E02H1.2 | ||||||
sjj_E02H1.2 | ||||||
smd_E02H1.2:2 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (55) | ||||||
RNAi_result | WBRNAi00043598 | |||||
WBRNAi00030464 | ||||||
WBRNAi00062184 | ||||||
WBRNAi00012642 | ||||||
Microarray_results (18) | ||||||
Brief_identification | GTPase Era, mitochondrial | Accession_evidence | UniProt | SP:Q09523 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf979651 | |||||
Method | curated |