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WormBase Tree Display for CDS: CRE09014b

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Name Class

CRE09014bSMapS_parentSequenceCrem_Contig2
StructureSource_exons148
29493029
30833844
38984170
42284806
48595131
52315746
DB_infoDatabaseTREEFAMTREEFAM_IDTF350492
DB_remarkCRE-LEA-1 protein
OriginFrom_laboratoryRW
SpeciesCaenorhabditis remanei
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformAccession_evidenceEMBLDR781661
VisibleGeneWBGene00063684
Corresponding_transcriptCRE09014b.1
Corresponding_proteinRP49966
Corresponding_oligo_setGPL14146_CRE09014_1987-2046_0.836_95_C
GPL14146_CRE09014_2289-2348_0.913_7_B
GPL14146_CRE09014_2335-2394_0.951_1_A
Matching_cDNADT936062Inferred_automaticallytranscript_builder.pl
DR780726Inferred_automaticallytranscript_builder.pl
DR782025Inferred_automaticallytranscript_builder.pl
DR408497Inferred_automaticallytranscript_builder.pl
DR781661Inferred_automaticallytranscript_builder.pl
DR775767Inferred_automaticallytranscript_builder.pl
DR780408Inferred_automaticallytranscript_builder.pl
DR777531Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14146_CRE09014_1987-2046_0.836_95_C
GPL14146_CRE09014_2289-2348_0.913_7_B
GPL14146_CRE09014_2335-2394_0.951_1_A
RNASeq_FPKMWBls:00000041.24319From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
2.4e-05From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (54)
WBls:00000270.004665From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
2.1e-05From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000382.08818From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004110.044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
16.2078From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
31.3392From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
3.30199From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
3.72424From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
4.84971From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:00000630From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
16.7529From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
4.24294From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
6.04805From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
6.55061From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
7e-06From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
8.91949From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
Remarkmade this isoform based on EST data(DR781661)[20090401 po]Accession_evidenceEMBLDR781661
Methodcurated