WormBase Tree Display for CDS: CJA41817
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| CJA41817 | SMap | S_parent | Sequence | Cjap.Contig8494 | |
|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 352 | ||
| 412 | 686 | ||||
| 743 | 853 | ||||
| 907 | 1069 | ||||
| DB_info | DB_remark | CJP-UNC-86 protein; contains similarity to Pfam domains PF00046 (Homeodomain), PF00157 (Pou domain - N-terminal to homeobox domain); contains similarity to Interpro domains IPR013847 (POU domain), IPR000327 (POU-specific domain), IPR001356 (Homeobox domain), IPR010982 (Lambda repressor-like, DNA-binding domain superfamily), IPR009057 (Homeobox-like domain superfamily) | |||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis japonica | ||||
| Properties | Coding (2) | ||||
| Start_not_found | 2 | ||||
| Visible | Gene | WBGene00217665 | |||
| Corresponding_transcript | CJA41817.1 | ||||
| Corresponding_protein | JA46137 | ||||
| Matching_cDNA | japonica_GG1198|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||
| RNASeq_FPKM (4) | |||||
| Remark | based on Augustus prediction Cjap.Contig8494.g5895.t1[100726 mh6] | ||||
| Method | curated |
