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WormBase Tree Display for CDS: CJA32081b

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Name Class

CJA32081bSMapS_parentSequenceCjap.Contig17130
StructureSource_exons124
432892
17991933
19802100
DB_infoDB_remarkCJP-HENN-1 protein; contains similarity to Interpro domains IPR026610 (3'-RNA ribose 2'-O-methyltransferase, Hen1), IPR029063 (S-adenosyl-L-methionine-dependent methyltransferase superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00207928
Corresponding_transcriptCJA32081b.1
Corresponding_proteinJA47697
RNASeq_FPKMWBls:000000420.4657From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.003405From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.005091From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
0.018835From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.040726From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.087992From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
13.8382From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
14.4357From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
16.4053From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
17.464From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
8.48942From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
8.77918From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
Remarkbased on Augustus prediction Cjap.Contig17130.g14028.t3[100726 mh6]
Methodcurated