Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: CJA18856b

expand all nodes | collapse all nodes | view schema

Name Class

CJA18856bEvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig18192
StructureSource_exons1150
281396
463565
609695
848916
9631096
11501239
23972541
26082703
34703712
DB_infoDB_remarkCJP-BYN-1 protein; contains similarity to Pfam domain PF05291 (Bystin); contains similarity to Interpro domain IPR007955 (Bystin)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00138060
Corresponding_transcriptCJA18856b.1
Corresponding_proteinJA00596
Corresponding_oligo_setGPL14145_CJA18856_1023-1082_0.931_8_A
GPL14145_CJA18856_1187-1246_0.967_1_B
Matching_cDNAjaponica_GG10941|c0_g2_i1Inferred_automaticallytranscript_builder.pl
japonica_GG10941|c0_g3_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA18856_1023-1082_0.931_8_A
GPL14145_CJA18856_1187-1246_0.967_1_B
RNASeq_FPKMWBls:000000440.4083From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002759.9355From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003824.4974From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
31.4526From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004112.1592From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
15.2936From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
17.3019From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
18.0348From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
36.8625From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
49.7384From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
51.0032From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
53.8161From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
Remarkbased on Augustus prediction Cjap.Contig18192.g27571.t2[100726 mh6]
Methodcurated