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WormBase Tree Display for CDS: CJA17926b

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Name Class

CJA17926bSMapS_parentSequenceCjap.Contig18059
StructureSource_exons1168
12451508
15521694
17501930
27042798
28892981
30313225
32963404
DB_infoDB_remarkCJP-EAT-5 protein; contains similarity to Pfam domain PF00876 (Innexin); contains similarity to Interpro domain IPR000990 (Innexin)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00137130
Corresponding_transcriptCJA17926b.1
Corresponding_proteinJA09041
Corresponding_oligo_setGPL14145_CJA17926_631-690_0.805_55_C
GPL14145_CJA17926_1013-1072_0.911_6_B
GPL14145_CJA17926_1176-1235_0.959_1_A
Microarray_resultsGPL14145_CJA17926_1013-1072_0.911_6_B
GPL14145_CJA17926_1176-1235_0.959_1_A
GPL14145_CJA17926_631-690_0.805_55_C
RNASeq_FPKMWBls:00000041.81055From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000271.03279From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.000364From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
1.83165From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.537403From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.807259From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
1.7e-05From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2.1e-05From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
2.6e-05From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
3.8e-05From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
4e-05From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
8.2e-05From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
Remarkbased on Augustus prediction Cjap.Contig18059.g24012.t1[100726 mh6]
Methodcurated