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WormBase Tree Display for CDS: CJA14509

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Name Class

CJA14509EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig5144
StructureSource_exons1129
23882916
30673140
46714955
50095149
DB_infoDB_remarkCJP-INX-15 protein; contains similarity to Pfam domain PF00876 (Innexin); contains similarity to Interpro domain IPR000990 (Innexin)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00133713
Corresponding_transcriptCJA14509.1
Corresponding_proteinJA66315
Corresponding_oligo_setGPL14145_CJA14509_120-179_0.832_35_C
GPL14145_CJA14509_432-491_0.827_38_B
GPL14145_CJA14509_696-755_0.844_29_A
Matching_cDNAFD513375Inferred_automaticallytranscript_builder.pl
japonica_GG9970|c0_g1_i1Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA14509_120-179_0.832_35_C
GPL14145_CJA14509_432-491_0.827_38_B
GPL14145_CJA14509_696-755_0.844_29_A
RNASeq_FPKMWBls:000000472.0953From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002730.7824From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003837.2316From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
43.2858From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004110.3437From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
10.4424From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
11.0027From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
8.07011From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
8.50733From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
8.80312From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
8.83827From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
9.7216From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
Remarkbased on Augustus prediction Cjap.Contig5144.g3673.t1[100726 mh6]
Methodcurated