Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: CJA12677b

expand all nodes | collapse all nodes | view schema

Name Class

CJA12677bEvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig18202
StructureSource_exons147
109244
304558
602787
8631395
14451745
17911865
DB_infoDB_remarkCJP-CYP-13B1 protein; contains similarity to Pfam domain PF00067 (Cytochrome P450); contains similarity to Interpro domains IPR001128 (Cytochrome P450), IPR002401 (Cytochrome P450, E-class, group I), IPR036396 (Cytochrome P450 superfamily)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
Isoform
VisibleGeneWBGene00131881
Corresponding_transcriptCJA12677b.1
Corresponding_proteinJA61261
Corresponding_oligo_setGPL14145_CJA12677_345-404_0.852_50_B
GPL14145_CJA12677_1228-1287_0.892_20_A
GPL14145_CJA12677_1386-1445_0.927_7_C
Microarray_resultsGPL14145_CJA12677_1228-1287_0.892_20_A
GPL14145_CJA12677_1386-1445_0.927_7_C
GPL14145_CJA12677_345-404_0.852_50_B
RNASeq_FPKMWBls:00000041.41161From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000277.13021From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.327746From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
1.34468From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.238704From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
0.427857From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.428335From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.546908From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.548406From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.563195From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.617114From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.824949From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
Remarkbased on Augustus prediction Cjap.Contig18202.g28123.t2[100726 mh6]
Methodcurated