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WormBase Tree Display for CDS: CJA10673a

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Name Class

CJA10673aSMapS_parentSequenceCjap.Contig18198
StructureSource_exons184
304428
469646
23822483
25522699
27602962
DB_infoDB_remarkCJP-DYF-18 protein; contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
Isoform
VisibleGeneWBGene00129877
Corresponding_transcriptCJA10673a.1
Corresponding_proteinJA44787
Corresponding_oligo_setGPL14145_CJA10673_364-423_0.922_4_C
GPL14145_CJA10673_525-584_0.847_45_A
GPL14145_CJA10673_662-721_0.923_3_B
Microarray_resultsGPL14145_CJA10673_364-423_0.922_4_C
GPL14145_CJA10673_525-584_0.847_45_A
GPL14145_CJA10673_662-721_0.923_3_B
RNASeq_FPKMWBls:00000046.07378From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.280576From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.685414From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
0.798307From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.073489From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.16716From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.228206From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.261688From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.33879From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.343861From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
0.367548From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.576428From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
Remarkbased on Augustus prediction Cjap.Contig18198.g27912.t1[100726 mh6]
Methodcurated