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WormBase Tree Display for CDS: CJA10345

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Name Class

CJA10345SMapS_parentSequenceCjap.Contig17052
StructureSource_exons1140
560670
37283880
52285495
DB_infoDB_remarkCJP-RGS-4 protein; contains similarity to Pfam domain PF00615 (Regulator of G protein signaling domain); contains similarity to Interpro domains IPR024066 (RGS, subdomain 1/3), IPR036305 (RGS domain superfamily), IPR016137 (RGS domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00129549
Corresponding_transcriptCJA10345.1
Corresponding_proteinJA39562
Corresponding_oligo_setGPL14145_CJA10345_243-302_0.711_40_B
GPL14145_CJA10345_475-534_0.953_1_A
Microarray_resultsGPL14145_CJA10345_243-302_0.711_40_B
GPL14145_CJA10345_475-534_0.953_1_A
RNASeq_FPKMWBls:000000410.1963From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002728.6394From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003819.1922From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
24.1381From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000413.06665From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
6.19349From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
6.45305From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
7.28921From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
7.39582From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
7.7923From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
8.61527From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
9.91153From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
Remarkbased on Augustus prediction Cjap.Contig17052.g13281.t1[100726 mh6]
Methodcurated