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WormBase Tree Display for CDS: CJA07832

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Name Class

CJA07832SMapS_parentSequenceCjap.Contig18143
StructureSource_exons1142
183326
7901037
15471888
19352087
DB_infoDatabaseTREEFAMTREEFAM_IDTF313052
DB_remarkCJP-PAPL-1 protein; contains similarity to Pfam domains PF00149 (Calcineurin-like phosphoesterase), PF16656 (Purple acid Phosphatase, N-terminal domain); contains similarity to Interpro domains IPR029052 (Metallo-dependent phosphatase-like), IPR015914 (Purple acid phosphatase, N-terminal), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type), IPR008963 (Purple acid phosphatase-like, N-terminal)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00127036
Corresponding_transcriptCJA07832.1
Corresponding_proteinJA59025
Corresponding_oligo_setGPL14145_CJA07832_575-634_0.890_6_C
GPL14145_CJA07832_697-756_0.605_140_B
Microarray_resultsGPL14145_CJA07832_575-634_0.890_6_C
GPL14145_CJA07832_697-756_0.605_140_B
RNASeq_FPKMWBls:00000044.98833From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002721.6003From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003832.0883From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
36.0831From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004112.0176From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
12.1188From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
12.1648From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
12.488From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
15.5591From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
16.4104From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
18.0693From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
18.802From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
Remarkbased on Augustus prediction Cjap.Contig18143.g25945.t1[100726 mh6]
Methodcurated