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WormBase Tree Display for CDS: CJA01250

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Name Class

CJA01250SMapS_parentSequenceCjap.Contig17617
StructureSource_exons12481
DB_infoDB_remarkcontains similarity to Pfam domain PF00098 (Zinc knuckle); contains similarity to Interpro domains IPR021109 (Aspartic peptidase domain superfamily), IPR036875 (Zinc finger, CCHC-type superfamily), IPR001878 (Zinc finger, CCHC-type)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusPredicted
End_not_found
VisibleGeneWBGene00120454
Corresponding_transcriptCJA01250.1
Corresponding_proteinJA54188
RNASeq_FPKMWBls:00000040.042919From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.170713From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380.056179From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.02086From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.022048From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.025552From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.042155From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.045211From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.060505From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.113309From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
Remarkbased on Augustus prediction Cjap.Contig17617.g18700.t1[100726 mh6]
Methodcurated