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WormBase Tree Display for CDS: CJA00558

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Name Class

CJA00558EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig18202
StructureSource_exons136
216368
517618
679782
13891596
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00119762
Corresponding_transcriptCJA00558.1
Corresponding_proteinJA03122
Corresponding_oligo_setGPL14145_CJA00558_204-263_0.888_2_C
GPL14145_CJA00558_302-361_0.896_1_B
GPL14145_CJA00558_483-542_0.663_41_A
Matching_cDNAjaponica_GG15369|c3_g1_i2Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA00558_204-263_0.888_2_C
GPL14145_CJA00558_302-361_0.896_1_B
GPL14145_CJA00558_483-542_0.663_41_A
RNASeq_FPKMWBls:00000045.9404From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000272.58505From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000383.43975From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
4.41752From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:00000410.425899From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
0.65268From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.698842From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
0.767363From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
1.10405From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
1.22024From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
1.31396From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
1.51748From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
Remarkbased on Augustus prediction Cjap.Contig18202.g28150.t1[100726 mh6]
Methodcurated