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WormBase Tree Display for CDS: CJA00181

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Name Class

CJA00181EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCjap.Contig17130
StructureSource_exons160
110236
289368
419505
27673078
DB_infoDatabaseTREEFAMTREEFAM_IDTF314078
DB_remarkCJP-MOB-4 protein; contains similarity to Pfam domain PF03637 (Mob1/phocein family); contains similarity to Interpro domains IPR036703 (MOB kinase activator superfamily), IPR005301 (MOB kinase activator family)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis japonica
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00119385
Corresponding_transcriptCJA00181.1
Corresponding_proteinJA06696
Corresponding_oligo_setGPL14145_CJA00181_196-255_0.901_11_C
GPL14145_CJA00181_437-496_0.944_2_B
GPL14145_CJA00181_587-646_0.964_1_A
Matching_cDNAFF109462Inferred_automaticallytranscript_builder.pl
FF115903Inferred_automaticallytranscript_builder.pl
FF138824Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14145_CJA00181_196-255_0.901_11_C
GPL14145_CJA00181_437-496_0.944_2_B
GPL14145_CJA00181_587-646_0.964_1_A
RNASeq_FPKMWBls:0000004165.783From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002753.7799From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003841.8186From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
52.9325From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:0000041101.224From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
167.469From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
177.565From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
181.765From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
74.9995From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
76.5744From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
94.8613From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
95.7666From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
Remarkbased on Augustus prediction Cjap.Contig17130.g14024.t1[100726 mh6]
Methodcurated