WormBase Tree Display for CDS: CBN28243

CBN28243 SMap: S_parent: Sequence: Cbre_Contig62
  Structure: Source_exons (24)
  DB_info: DB_remark: contains similarity to Pfam domains PF00092 (von Willebrand factor type A domain), PF01390 (SEA domain); contains similarity to Interpro domains IPR036465 (von Willebrand factor A-like domain superfamily), IPR036364 (SEA domain superfamily), IPR000082 (SEA domain), IPR002035 (von Willebrand factor, type A)
  Origin: From_laboratory: RW
    Species: Caenorhabditis brenneri
  Properties: Coding: CDS
      Prediction_status: Predicted
  Visible: Gene: WBGene00190208
    Corresponding_transcript: CBN28243.1
    Corresponding_protein: CN35010
    Corresponding_oligo_set: GPL14142_CBN28243_1080-1139_0.795_133_C
      GPL14142_CBN28243_3242-3301_0.918_18_A
      GPL14142_CBN28243_326-385_0.795_130_B
    Microarray_results: GPL14142_CBN28243_326-385_0.795_130_B
      GPL14142_CBN28243_1080-1139_0.795_133_C
      GPL14142_CBN28243_3242-3301_0.918_18_A
    RNASeq_FPKM: WBls:0000002 0.364875 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        0.588129 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.732994 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.959336 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        1.16174 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        1.5585 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        1.75771 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        9.25724 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 0.701066 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        10.0366 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        11.4346 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        14.8388 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        15.3974 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        8.02058 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
      WBls:0000038 17.924 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        22.6906 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (15)
    Remark: [20090520 js] Original name Cbre_Contig62.brenneri.jigsaw.51
  Method: curated