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WormBase Tree Display for CDS: CBN24806

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Name Class

CBN24806SMapS_parentSequenceCbre_Contig127
StructureSource_exons149
244560
617808
DB_infoDatabaseTREEFAMTREEFAM_IDTF316923
DB_remarkCBN-GRD-3 protein; contains similarity to Pfam domain PF04155 (Ground-like domain); contains similarity to Interpro domain IPR007284 (Ground-like domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis brenneri
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00163531
Corresponding_transcriptCBN24806.1
Corresponding_proteinCN13276
Corresponding_oligo_setGPL14142_CBN24806_204-263_0.924_4_B
GPL14142_CBN24806_286-345_0.949_1_C
GPL14142_CBN24806_376-435_0.908_11_A
Matching_cDNAFD511666Inferred_automaticallytranscript_builder.pl
FF083794Inferred_automaticallytranscript_builder.pl
FF099660Inferred_automaticallytranscript_builder.pl
FF104049Inferred_automaticallytranscript_builder.pl
FF105842Inferred_automaticallytranscript_builder.pl
JZ125113Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14142_CBN24806_204-263_0.924_4_B
GPL14142_CBN24806_286-345_0.949_1_C
GPL14142_CBN24806_376-435_0.908_11_A
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
100.303From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
108.648From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
118.844From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
329.224From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
45.62From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
72.0946From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
86.4645From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
90.2261From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
14.0929From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
22.4566From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
43.8819From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
47.1957From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
54.1863From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:0000038305.106From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
323.551From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (14)
RemarkContig222.brenneri.jigsaw.14.mRNA14
Methodcurated