WormBase Tree Display for CDS: CBN16590
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| CBN16590 | SMap | S_parent | Sequence | Cbre_Contig67 | |
|---|---|---|---|---|---|
| Structure | Source_exons (12) | ||||
| DB_info | Database | TREEFAM | TREEFAM_ID | TF351263 | |
| DB_remark | CBN-UNC-44 protein; contains similarity to Pfam domains PF00023 (Ankyrin repeat), PF00531 (Death domain), PF00791 (ZU5 domain), PF12796 (Ankyrin repeats (3 copies)), PF13637 (Ankyrin repeats (many copies)), PF17809 (UPA domain); contains similarity to Interpro domains IPR011029 (Death-like domain superfamily), IPR000906 (ZU5 domain), IPR002110 (Ankyrin repeat), IPR036770 (Ankyrin repeat-containing domain superfamily), IPR040745 (Ankyrin, UPA domain), IPR000488 (Death domain), IPR020683 (Domain of unknown function DUF3447) | ||||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis brenneri | ||||
| Properties | Coding (2) | ||||
| Visible | Gene | WBGene00155315 | |||
| Corresponding_transcript | CBN16590.1 | ||||
| Corresponding_protein | CN26067 | ||||
| Matching_cDNA | FF101760 | Inferred_automatically | transcript_builder.pl | ||
| FF101789 | Inferred_automatically | transcript_builder.pl | |||
| RNASeq_FPKM (5) | |||||
| Remark | [20081101 mh] original nGASP gene : Contig588.brenneri.jigsaw.1.mRNA1 | ||||
| [20081113 db] corrected translation frame of this protein | |||||
| Method | curated |
