WormBase Tree Display for CDS: CBN12611

CBN12611 SMap: S_parent: Sequence: Cbre_Contig18
  Structure: Source_exons: 1 206
      284 861
      965 1935
      1992 2324
      2382 3641
      3691 3768
      3850 4087
      4240 4310
      4352 4504
      4548 4679
  DB_info: Database: TREEFAM TREEFAM_ID TF319713
    DB_remark: contains similarity to Pfam domain PF10350 (THADA/TRM732, DUF2428); contains similarity to Interpro domains IPR019442 (THADA/TRM732, DUF2428), IPR016024 (Armadillo-type fold)
  Origin: From_laboratory: RW
    Species: Caenorhabditis brenneri
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00151336
    Corresponding_transcript: CBN12611.1
    Corresponding_protein: CN17881
    Corresponding_oligo_set: GPL14142_CBN12611_2411-2470_0.706_411_B
      GPL14142_CBN12611_3271-3330_0.903_16_C
      GPL14142_CBN12611_3801-3860_0.942_3_A
    Matching_cDNA: FF087444 Inferred_automatically: transcript_builder.pl
      FF097198 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14142_CBN12611_2411-2470_0.706_411_B
      GPL14142_CBN12611_3271-3330_0.903_16_C
      GPL14142_CBN12611_3801-3860_0.942_3_A
    RNASeq_FPKM: WBls:0000002 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        10.0149 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        12.9019 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        14.5754 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        15.0714 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        17.0692 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        17.8275 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        21.953 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        7.78023 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        78.7918 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        15.0656 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        15.7096 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        16.2318 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        43.6115 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        43.8404 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 21.4591 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        21.4939 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (15)
    Remark: Contig665.brenneri.jigsaw.16.mRNA16
  Method: curated