WormBase Tree Display for CDS: CBN05548
expand all nodes | collapse all nodes | view schema
CBN05548 | SMap | S_parent | Sequence | Cbre_Contig13 | |
---|---|---|---|---|---|
Structure | Source_exons (20) | ||||
DB_info | Database | TREEFAM | TREEFAM_ID | TF316296 | |
DB_remark | CBN-UNC-49 protein; contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region); contains similarity to Interpro domains IPR036719 (Neurotransmitter-gated ion-channel transmembrane domain superfamily), IPR036734 (Neurotransmitter-gated ion-channel ligand-binding domain superfamily), IPR006028 (Gamma-aminobutyric acid A receptor/Glycine receptor alpha), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding domain), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain) | ||||
Origin (2) | |||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Visible | Gene | WBGene00144273 | |||
Corresponding_transcript | CBN05548.1 | ||||
Corresponding_protein | CN16632 | ||||
Corresponding_oligo_set | GPL14142_CBN05548_1516-1575_0.726_142_C | ||||
GPL14142_CBN05548_2003-2062_0.793_73_B | |||||
GPL14142_CBN05548_2266-2325_0.891_18_A | |||||
Microarray_results | GPL14142_CBN05548_1516-1575_0.726_142_C | ||||
GPL14142_CBN05548_2003-2062_0.793_73_B | |||||
GPL14142_CBN05548_2266-2325_0.891_18_A | |||||
RNASeq_FPKM (5) | |||||
Remark | Contig119.brenneri.jigsaw.26.mRNA26 | ||||
Method | curated |