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WormBase Tree Display for CDS: CBN02880

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Name Class

CBN02880SMapS_parentSequenceCbre_Contig35
StructureSource_exons (13)
DB_infoDatabaseTREEFAMTREEFAM_IDTF317710
DB_remarkCBN-SEL-15 protein; contains similarity to Pfam domains PF07714 (Protein tyrosine and serine/threonine kinase), PF12796 (Ankyrin repeats (3 copies)); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR002110 (Ankyrin repeat), IPR036770 (Ankyrin repeat-containing domain superfamily), IPR001245 (Serine-threonine/tyrosine-protein kinase, catalytic domain), IPR020683 (Domain of unknown function DUF3447)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis brenneri
PropertiesCodingCDS
Prediction_statusPredicted
VisibleGeneWBGene00141605
Corresponding_transcriptCBN02880.1
Corresponding_proteinCN19121
Corresponding_oligo_setGPL14142_CBN02880_1491-1550_0.869_51_C
GPL14142_CBN02880_1697-1756_0.897_23_B
GPL14142_CBN02880_1969-2028_0.907_18_A
Microarray_resultsGPL14142_CBN02880_1491-1550_0.869_51_C
GPL14142_CBN02880_1697-1756_0.897_23_B
GPL14142_CBN02880_1969-2028_0.907_18_A
RNASeq_FPKMWBls:00000020.28353From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
0.420043From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0.693725From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
1.21154From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
1.6905From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
17.2136From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
2.75395From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
3.87709From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
15.1757From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
15.2056From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
17.0985From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
17.1458From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
17.5636From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003812.899From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
13.7753From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (14)
RemarkContig8.brenneri.jigsaw.31.mRNA31
Methodcurated