WormBase Tree Display for CDS: C50B6.2
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C50B6.2 | SMap | S_parent | Sequence | C50B6 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 398 | |||
448 | 737 | |||||
793 | 1145 | |||||
1192 | 1899 | |||||
DB_info | Database | TrEMBL | UniProtAcc | O17687 | ||
UniProt | UniProtAcc | O17687 | ||||
UniProt_GCRP | UniProtAcc | O17687 | ||||
AlphaFold | entry | O17687 | ||||
NCBI_protein | GI_number | GI:3875052 | ||||
TREEFAM | TREEFAM_ID | TF317297 | ||||
Protein_id | CHROMOSOME_V | CAB02850 | 1 | |||
DB_remark | NASP-2 protein; contains similarity to Pfam domain PF10516 (SHNi-TPR); contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR019544 (Tetratricopeptide, SHNi-TPR domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00008218 | ||||
Corresponding_transcript | C50B6.2.1 | |||||
Corresponding_protein | CE08871 | |||||
Corresponding_PCR_product | cenix:10-c12 | |||||
mv_C50B6.2 | ||||||
sjj_C50B6.2 | ||||||
Corresponding_oligo_set (13) | ||||||
Matching_cDNA (161) | ||||||
RNAi_result | WBRNAi00007819 | |||||
WBRNAi00012175 | ||||||
WBRNAi00077602 | ||||||
WBRNAi00030008 | ||||||
WBRNAi00042850 | ||||||
Microarray_results (14) | ||||||
Brief_identification | Tetratricopeptide SHNi-TPR domain-containing protein | Accession_evidence | UniProt | TR:O17687 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf016034 | |||||
Method | curated |