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WormBase Tree Display for CDS: C50B6.2

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Name Class

C50B6.2SMapS_parentSequenceC50B6
StructureSource_exons1398
448737
7931145
11921899
DB_infoDatabaseTrEMBLUniProtAccO17687
UniProtUniProtAccO17687
UniProt_GCRPUniProtAccO17687
AlphaFoldentryO17687
NCBI_proteinGI_numberGI:3875052
TREEFAMTREEFAM_IDTF317297
Protein_idCHROMOSOME_VCAB028501
DB_remarkNASP-2 protein; contains similarity to Pfam domain PF10516 (SHNi-TPR); contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR019544 (Tetratricopeptide, SHNi-TPR domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00008218
Corresponding_transcriptC50B6.2.1
Corresponding_proteinCE08871
Corresponding_PCR_productcenix:10-c12
mv_C50B6.2
sjj_C50B6.2
Corresponding_oligo_set (13)
Matching_cDNA (161)
RNAi_resultWBRNAi00007819
WBRNAi00012175
WBRNAi00077602
WBRNAi00030008
WBRNAi00042850
Microarray_results (14)
Brief_identificationTetratricopeptide SHNi-TPR domain-containing proteinAccession_evidenceUniProtTR:O17687
RNASeq_FPKM (74)
Associated_featureWBsf016034
Methodcurated