WormBase Tree Display for CDS: C44B7.9
expand all nodes | collapse all nodes | view schema
C44B7.9 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | C44B7 | ||
Structure | Source_exons | 1 | 122 | ||
602 | 823 | ||||
884 | 1051 | ||||
1101 | 1224 | ||||
1471 | 1593 | ||||
1640 | 1818 | ||||
1870 | 2677 | ||||
2725 | 2803 | ||||
3430 | 3590 | ||||
DB_info | Database | TrEMBL | UniProtAcc | Q18598 | |
UniProt | UniProtAcc | Q18598 | |||
UniProt_GCRP | UniProtAcc | Q18598 | |||
AlphaFold | entry | Q18598 | |||
NCBI_protein | GI_number | GI:351065581 | |||
TREEFAM | TREEFAM_ID | TF105205 | |||
Protein_id | CHROMOSOME_II | CCD61563 | 1 | ||
DB_remark | PMP-2 protein; contains similarity to Pfam domains PF00005 (ABC transporter), PF06472 (ABC transporter transmembrane region 2); contains similarity to Interpro domains IPR003439 (ABC transporter-like, ATP-binding domain), IPR011527 (ABC transporter type 1, transmembrane domain), IPR036640 (ABC transporter type 1, transmembrane domain superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR003593 (AAA+ ATPase domain), IPR005283 (Peroxysomal long chain fatty acyl transporter) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00004059 | |||
Corresponding_transcript | C44B7.9.1 | ||||
Corresponding_protein | CE02547 | ||||
Corresponding_PCR_product | cenix:77-e11 | ||||
mv_C44B7.9 | |||||
sjj_C44B7.9 | |||||
smd_C44B7.9 | |||||
Corresponding_oligo_set (17) | |||||
Matching_cDNA (77) | |||||
RNAi_result | WBRNAi00103675 | ||||
WBRNAi00029789 | |||||
WBRNAi00042434 | |||||
WBRNAi00102607 | |||||
WBRNAi00102855 | |||||
WBRNAi00011916 | |||||
Microarray_results (20) | |||||
RNASeq_FPKM (74) | |||||
Method | curated |