WormBase Tree Display for CDS: C43E11.5
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C43E11.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C43E11 | |||
Structure | Source_exons | 1 | 81 | |||
358 | 666 | |||||
716 | 1096 | |||||
1141 | 1395 | |||||
1446 | 1526 | |||||
DB_info | Database | TrEMBL | UniProtAcc | P91147 | ||
UniProt | UniProtAcc | P91147 | ||||
UniProt_GCRP | UniProtAcc | P91147 | ||||
AlphaFold | entry | P91147 | ||||
NCBI_protein | GI_number | GI:351050551 | ||||
TREEFAM | TREEFAM_ID | TF318637 | ||||
Protein_id | CHROMOSOME_I | CCD65153 | 1 | |||
DB_remark | contains similarity to Pfam domain PF00102 (Protein-tyrosine phosphatase); contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR029021 (Protein-tyrosine phosphatase-like), IPR000242 (Tyrosine-specific protein phosphatase, PTPase domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00016605 | ||||
Corresponding_transcript | C43E11.5.1 | |||||
Corresponding_protein | CE08683 | |||||
Corresponding_PCR_product | cenix:193-d12 | |||||
mv_C43E11.5 | ||||||
sjj_C43E11.5 | ||||||
sjj_C50F2.5_1 | ||||||
smd_C43E11.5 | ||||||
Corresponding_oligo_set | Aff_C43E11.5 | |||||
GPL3518_CE08683 | ||||||
GPL8304_CE_WBGene00016605_A | ||||||
Matching_cDNA (26) | ||||||
RNAi_result | WBRNAi00042930 | |||||
WBRNAi00003211 | ||||||
WBRNAi00029760 | ||||||
WBRNAi00042384 | ||||||
WBRNAi00001343 | ||||||
WBRNAi00003143 | ||||||
Microarray_results | SMD_C43E11.5 | |||||
SMD_C43E11.5:2 | ||||||
Aff_C43E11.5 | ||||||
GPL3518_CE08683 | ||||||
GPL8304_CE_WBGene00016605_A | ||||||
Brief_identification | Tyrosine-protein phosphatase domain-containing protein | Accession_evidence | UniProt | TR:P91147 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |