WormBase Tree Display for CDS: C41A3.1a
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C41A3.1a | SMap | S_parent | Sequence | C41A3 | |
---|---|---|---|---|---|
Structure | Source_exons (30) | ||||
DB_info | Database | KEGG | KEGG_id | 3.1.2.14 | |
TrEMBL | UniProtAcc | Q18559 | |||
UniProt | UniProtAcc | Q18559 | |||
UniProt_GCRP | UniProtAcc | Q18559 | |||
AlphaFold | entry | Q18559 | |||
NCBI_protein | GI_number | GI:379656896 | |||
Protein_id | CHROMOSOME_X | CCD62779 | 2 | ||
DB_remark | PKS-1 protein; contains similarity to Pfam domains PF00109 (Beta-ketoacyl synthase, N-terminal domain), PF00501 (AMP-binding enzyme), PF00550 (Phosphopantetheine attachment site), PF00668 (Condensation domain), PF00698 (Acyl transferase domain), PF00975 (Thioesterase domain), PF02801 (Beta-ketoacyl synthase, C-terminal domain), PF08659 (KR domain), PF14765 (Polyketide synthase dehydratase N-terminal domain), PF16197 (Ketoacyl-synthetase C-terminal extension); contains similarity to Interpro domains IPR016035 (Acyl transferase/acyl hydrolase/lysophospholipase), IPR001242 (Condensation domain), IPR020841 (Polyketide synthase, beta-ketoacyl synthase domain), IPR036736 (ACP-like superfamily), IPR042099 (ANL, N-terminal domain), IPR042104 (Polyketide synthase, dehydratase domain superfamily), IPR023213 (Chloramphenicol acetyltransferase-like domain superfamily), IPR016036 (Malonyl-CoA ACP transacylase, ACP-binding), IPR013968 (Polyketide synthase, ketoreductase domain), IPR032821 (Polyketide synthase, C-terminal extension), IPR045851 (AMP-binding enzyme, C-terminal domain superfamily), IPR029058 (Alpha/Beta hydrolase fold), IPR014031 (Beta-ketoacyl synthase, C-terminal), IPR036291 (NAD(P)-binding domain superfamily), IPR014043 (Acyl transferase), IPR014030 (Beta-ketoacyl synthase, N-terminal), IPR049551 (Polyketide synthase, dehydratase domain, C-terminal), IPR000873 (AMP-dependent synthetase/ligase domain), IPR016039 (Thiolase-like), IPR020806 (Polyketide synthase, phosphopantetheine-binding domain), IPR009081 (Phosphopantetheine binding ACP domain), IPR001227 (Acyl transferase domain superfamily), IPR001031 (Thioesterase) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Partially_confirmed | ||||
Isoform | Curator_confirmed | WBPerson1983 | |||
Visible (12) | |||||
Method | curated |