WormBase Tree Display for CDS: C18E3.8
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| C18E3.8 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C18E3 | |||
| Structure | Source_exons | 1 | 131 | |||
| 182 | 305 | |||||
| 357 | 744 | |||||
| 926 | 1069 | |||||
| 1119 | 1204 | |||||
| 1546 | 1749 | |||||
| DB_info | Database | SwissProt | UniProtAcc | O02100 | ||
| UniProt | UniProtAcc | O02100 | ||||
| UniProt_GCRP | UniProtAcc | O02100 | ||||
| AlphaFold | entry | O02100 | ||||
| NCBI_protein | GI_number | GI:351050542 | ||||
| TREEFAM | TREEFAM_ID | TF315040 | ||||
| Protein_id | CHROMOSOME_I | CCD65145 | 1 | |||
| DB_remark | HOP-1 protein; contains similarity to Pfam domain PF01080 (Presenilin); contains similarity to Interpro domains IPR006639 (Presenilin/signal peptide peptidase), IPR042524 (Presenilin, C-terminal), IPR001108 (Peptidase A22A, presenilin) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00001985 | ||||
| Corresponding_transcript | C18E3.8.1 | |||||
| Corresponding_protein | CE08317 | |||||
| Corresponding_PCR_product | cenix:52-a10 | |||||
| cenix:82-f3 | ||||||
| mv_AAB84394 | ||||||
| sjj2_C18E3.8 | ||||||
| sjj_C18E3.8 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (34) | ||||||
| RNAi_result (15) | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Presenilin hop-1 | Accession_evidence | UniProt | SP:O02100 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf020646 | |||||
| Method | curated |
