WormBase Tree Display for CDS: C15H7.4
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| C15H7.4 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C15H7 | ||
| Structure | Source_exons | 1 | 42 | ||
| 103 | 236 | ||||
| 383 | 550 | ||||
| 604 | 822 | ||||
| 987 | 1137 | ||||
| 1182 | 1451 | ||||
| DB_info | Database | SwissProt | UniProtAcc | P34338 | |
| UniProt | UniProtAcc | P34338 | |||
| UniProt_GCRP | UniProtAcc | P34338 | |||
| AlphaFold | entry | P34338 | |||
| NCBI_protein | GI_number | GI:3874286 | |||
| TREEFAM | TREEFAM_ID | TF319460 | |||
| Protein_id | CHROMOSOME_III | CAA80126 | 1 | ||
| DB_remark | contains similarity to Pfam domain PF17339 (PH domain); contains similarity to Interpro domain IPR040443 (PH_15 domain) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Visible | Gene | WBGene00007611 | |||
| Corresponding_transcript | C15H7.4.1 | ||||
| Corresponding_protein | CE00082 | ||||
| Corresponding_PCR_product | TH:322G6 | ||||
| cenix:322-g6 | |||||
| mv_C15H7.4 | |||||
| sjj_C15H7.4 | |||||
| Corresponding_oligo_set (16) | |||||
| Matching_cDNA | male_Nanopore_Roach_94334 | ||||
| male_Nanopore_Roach_146875 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_152732 | Inferred_automatically | transcript_builder.pl | |||
| L4_Nanopore_Roach_38358 | |||||
| OSTF044C12_1 | Inferred_automatically | transcript_builder.pl | |||
| YA_Nanopore_Li_348203 | Inferred_automatically | transcript_builder.pl | |||
| elegans_PE_SS_GG2621|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_319089 | Inferred_automatically | transcript_builder.pl | |||
| L1_Nanopore_Li_318879 | Inferred_automatically | transcript_builder.pl | |||
| RNAi_result | WBRNAi00040627 | ||||
| WBRNAi00006167 | |||||
| WBRNAi00010800 | |||||
| WBRNAi00028931 | |||||
| Microarray_results (17) | |||||
| RNASeq_FPKM (74) | |||||
| Remark | K rich | ||||
| Method | curated |
