WormBase Tree Display for CDS: C08B6.4a
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C08B6.4a | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C08B6 | |||
Structure | Source_exons | 1 | 49 | |||
100 | 386 | |||||
444 | 538 | |||||
630 | 1285 | |||||
1361 | 1617 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q17816 | ||
UniProt | UniProtAcc | Q17816 | ||||
AlphaFold | entry | Q17816 | ||||
NCBI_protein | GI_number | GI:3874141 | ||||
Protein_id | CHROMOSOME_V | CAA96587 | 1 | |||
DB_remark | CHT-5 protein; contains similarity to Pfam domain PF00182 (Chitinase class I); contains similarity to Interpro domains IPR023346 (Lysozyme-like domain superfamily), IPR000726 (Glycoside hydrolase, family 19, catalytic) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | NDB | CB400855 | |||
Visible | Gene | WBGene00007425 | ||||
Corresponding_transcript | C08B6.4a.1 | |||||
Corresponding_protein | CE05241 | |||||
Corresponding_PCR_product | cenix:165-c3 | |||||
mv_C08B6.4 | ||||||
sjj_C08B6.4 | ||||||
Corresponding_oligo_set (22) | ||||||
Matching_cDNA (15) | ||||||
RNAi_result | WBRNAi00010431 | |||||
WBRNAi00040073 | ||||||
WBRNAi00028660 | ||||||
Microarray_results (23) | ||||||
Brief_identification | Glycoside hydrolase family 19 catalytic domain-containing protein | Accession_evidence | UniProt | TR:Q17816 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |