WormBase Tree Display for CDS: C08A9.7
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| C08A9.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C08A9 | |||
| Structure | Source_exons | 1 | 298 | |||
| 569 | 833 | |||||
| 885 | 1062 | |||||
| 1112 | 1366 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q17810 | ||
| UniProt | UniProtAcc | Q17810 | ||||
| UniProt_GCRP | UniProtAcc | Q17810 | ||||
| AlphaFold | entry | Q17810 | ||||
| NCBI_protein | GI_number | GI:373218832 | ||||
| TREEFAM | TREEFAM_ID | TF320081 | ||||
| Protein_id | CHROMOSOME_X | CCD63616 | 1 | |||
| DB_remark | LIDO-2 protein; contains similarity to Pfam domain PF03353 (Ras-mediated vulval-induction antagonist); contains similarity to Interpro domain IPR005020 (Protein LIN-8) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00015587 | ||||
| Corresponding_transcript | C08A9.7.1 | |||||
| Corresponding_protein | CE06789 | |||||
| Corresponding_PCR_product | cenix:68-e2 | |||||
| mv_C08A9.7 | ||||||
| sjj_C08A9.7 | ||||||
| Corresponding_oligo_set (13) | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_49629 | Inferred_automatically | transcript_builder.pl | |||
| OSTR219C11_1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG4|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_374364 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG4|c2_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| yk340a12.5 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG4|c3_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_263668 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF219C11_1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00040055 | |||||
| WBRNAi00028656 | ||||||
| WBRNAi00001694 | ||||||
| WBRNAi00010421 | ||||||
| Microarray_results (14) | ||||||
| Brief_identification | Myb_DNA-bind_3 domain-containing protein | Accession_evidence | UniProt | TR:Q17810 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
