Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: Bm8106

expand all nodes | collapse all nodes | view schema

Name Class

Bm8106SMapS_parentSequenceBm_v4_Chr4_scaffold_001
StructureSource_exons (40)
DB_infoDatabaseTrEMBLUniProtAccA0A0H5S0L5
UniProtUniProtAccA0A0H5S0L5
AlphaFoldentryA0A0H5S0L5
Protein_idBm_v4_Chr4_scaffold_001CRZ220461
DB_remarkBMA-MIG-6 protein; contains similarity to Pfam domains PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain), PF00090 (Thrombospondin type 1 domain), PF05986 (ADAM-TS Spacer 1), PF07679 (Immunoglobulin I-set domain), PF19030 (Thrombospondin type 1 domain), PF19236 (ADAMTS cysteine-rich domain); contains similarity to Interpro domains IPR045371 (ADAMTS/ADAMTS-like, cysteine-rich domain 3), IPR000884 (Thrombospondin type-1 (TSP1) repeat), IPR036383 (Thrombospondin type-1 (TSP1) repeat superfamily), IPR013098 (Immunoglobulin I-set), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain), IPR013783 (Immunoglobulin-like fold), IPR013273 (ADAMTS/ADAMTS-like), IPR036179 (Immunoglobulin-like domain superfamily), IPR010294 (ADAMTS/ADAMTS-like, Spacer 1), IPR003599 (Immunoglobulin subtype), IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byaugustus
Prediction_statusPartially_confirmed
VisibleGeneWBGene00228367
Corresponding_transcriptBm8106.1
Corresponding_proteinBM41882
Matching_cDNAbrugia_GG4467|c0_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG4616|c0_g2_i1Inferred_automaticallytranscript_builder.pl
brugia_GG4616|c0_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG3127|c0_g1_i1Inferred_automaticallytranscript_builder.pl
Brief_identificationprotein C37C3.6a , putativeAccession_evidenceTIGRBm1_11390
RNASeq_FPKMWBls:000007810.9135From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
11.4721From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
1.66737From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
1.72504From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
1.91922From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
29.4237From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
31.4616From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
WBls:000008050.4488From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
51.2851From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
60.2021From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
60.7125From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
WBls:0000081 (23)
WBls:000008218.0362From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
18.0793From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
18.641From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
20.6397From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
21.3329From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
WBls:0000083 (80)
WBls:00000928.20739From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
8.96779From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009412.1685From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
12.2792From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
WBls:000009710.4169From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
3.4623From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
47.2686From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
5.18175From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
7.93298From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
9.17937From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
WBls:00006620.756493From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
2.01139From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:00006630.47375From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Methodcurated