Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: Bm7037a

expand all nodes | collapse all nodes | view schema

Name Class

Bm7037aEvidenceCurator_confirmedWBPerson4055
Inferred_automaticallymake_isoforms.pl
SMapS_parentSequenceBm_v4_Chr4_scaffold_001
StructureSource_exons (24)
DB_infoDB_remarkBMA-PARP-1 protein; contains similarity to Pfam domains PF00644 (Poly(ADP-ribose) polymerase catalytic domain), PF00645 (Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region), PF02877 (Poly(ADP-ribose) polymerase, regulatory domain), PF05406 (WGR domain), PF08063 (PADR1 domain, zinc ribbon fold); contains similarity to Interpro domains IPR038650 (PADR1, C-terminal domain superfamily), IPR012982 (PARP1-like, PADR1 domain, zinc ribbon fold), IPR036930 (WGR domain superfamily), IPR004102 (Poly(ADP-ribose) polymerase, regulatory domain), IPR012317 (Poly(ADP-ribose) polymerase, catalytic domain), IPR001510 (Zinc finger, PARP-type), IPR036957 (Zinc finger, PARP-type superfamily), IPR008893 (WGR domain), IPR036616 (Poly(ADP-ribose) polymerase, regulatory domain superfamily)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byRATT
Prediction_statusConfirmed
IsoformCurator_confirmedWBPerson4055
VisibleGeneWBGene00227298
Corresponding_transcriptBm7037a.1
Corresponding_proteinBM30019
Matching_cDNAbrugia_GG5175|c6_g1_i3Inferred_automaticallytranscript_builder.pl
AI574544Inferred_automaticallytranscript_builder.pl
brugia_GG5175|c6_g1_i1Inferred_automaticallytranscript_builder.pl
IsoSeq_brugia_PB_4816_1Inferred_automaticallytranscript_builder.pl
AA088155Inferred_automaticallytranscript_builder.pl
brugia_GG5175|c6_g1_i2Inferred_automaticallytranscript_builder.pl
BE352771Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:000007820.8953From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
22.9619From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
25.2673From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
26.7829From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
50.0266From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
51.4575From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
55.0026From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
WBls:000008034.0226From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
38.0963From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
43.2287From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
43.6283From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (23)
WBls:000008231.1507From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
33.7046From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
34.3149From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
42.8237From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
42.9988From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
WBls:0000083 (80)
WBls:000009247.8048From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
52.0444From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009474.4466From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
81.6668From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000009727.4829From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
37.3767From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
44.7328From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
46.3703From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
58.1481From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
59.6431From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
WBls:000066240.7949From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
55.5157From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
WBls:000066355.3622From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Last_reviewed18 Jun 2018 15:00:08WBPerson4055
Remark[131112 pad] Renamed from Bm7037b as this is a single Isoform locus.Curator_confirmedWBPerson1983
Methodcurated