WormBase Tree Display for CDS: Bm6042a

Bm6042a Evidence: Curator_confirmed: WBPerson1867
  SMap: S_parent: Sequence: Bm_v4_Chr4_scaffold_001
  Structure: Source_exons (16)
  DB_info: Database: TrEMBL UniProtAcc A0A0J9Y6S8
      UniProt UniProtAcc A0A0J9Y6S8
      AlphaFold entry A0A0J9Y6S8
    Protein_id: Bm_v4_Chr4_scaffold_001 CDQ03532 1
    DB_remark: contains similarity to Pfam domains PF00249 (Myb-like DNA-binding domain), PF01426 (BAH domain), PF01448 (ELM2 domain), PF17226 (MTA R1 domain); contains similarity to Interpro domains IPR035170 (Metastasis-associated protein MTA1, R1 domain), IPR001005 (SANT/Myb domain), IPR040138 (Mesoderm induction early response protein/metastasis-associated protein), IPR001025 (Bromo adjacent homology (BAH) domain), IPR000679 (Zinc finger, GATA-type), IPR017930 (Myb domain), IPR000949 (ELM2 domain), IPR009057 (Homeobox-like domain superfamily), IPR043151 (Bromo adjacent homology (BAH) domain superfamily)
  Origin: From_laboratory: HX
    Species: Brugia malayi
  Properties: Coding: CDS
      CDS_predicted_by: RATT
      Prediction_status: Partially_confirmed
    Isoform: Inferred_automatically: xace
  Visible: Gene: WBGene00226303
    Corresponding_transcript: Bm6042a.1
    Corresponding_protein: BM31948
    Brief_identification: ELM2 domain containing protein Accession_evidence: TIGR Bm1_24545
    RNASeq_FPKM: WBls:0000078 0.0001 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
        0.000124 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
        0.000296 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
        2.4e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
        3.7e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
        6.8e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
        7.6e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
      WBls:0000080 0.000133 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
        6e-06 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
            RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
        9.9e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
      WBls:0000081 (18)
      WBls:0000082 1.0791 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
            RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
        1.53145 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
        1.73421 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
      WBls:0000083 (79)
      WBls:0000092 1.1e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
        1.2e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
      WBls:0000094 0.000918 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
        0.01122 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
      WBls:0000097 0.001784 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
        0.002359 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
        0.191447 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
        1.6e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
        2.8e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
        3.40164 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
      WBls:0000662 0.000558 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
        0.003298 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
      WBls:0000663 3.02233 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
  Method: curated