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WormBase Tree Display for CDS: Bm5625a

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Name Class

Bm5625aEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceBm_v4_Chr4_scaffold_001
StructureSource_exons1157
376459
594695
921988
11401198
14151568
17341858
19712058
22672509
26982928
DB_infoDatabaseTrEMBLUniProtAccA0A0K0JJM7
UniProtUniProtAccA0A0K0JJM7
AlphaFoldentryA0A0K0JJM7
Protein_idBm_v4_Chr4_scaffold_001CDP961211
DB_remarkcontains similarity to Pfam domains PF00994 (Probable molybdopterin binding domain), PF03453 (MoeA N-terminal region (domain I and II)), PF03454 (MoeA C-terminal region (domain IV)); contains similarity to Interpro domains IPR036688 (MoeA, C-terminal, domain IV superfamily), IPR005111 (MoeA, C-terminal, domain IV), IPR036425 (MoaB/Mog-like domain superfamily), IPR001453 (MoaB/Mog domain), IPR038987 (Molybdopterin biosynthesis protein MoeA-like), IPR036135 (MoeA, N-terminal and linker domain superfamily), IPR005110 (MoeA, N-terminal and linker domain)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byRATT
Prediction_statusConfirmed
IsoformInferred_automaticallyxace
VisibleGeneWBGene00225886
Corresponding_transcriptBm5625a.1
Corresponding_proteinBM21666
Matching_cDNAbrugia_GG6320|c15_g3_i1Inferred_automaticallytranscript_builder.pl
brugia_GG6320|c15_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG6320|c9_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG4389|c0_g2_i1Inferred_automaticallytranscript_builder.pl
brugia_GG6320|c15_g2_i2Inferred_automaticallytranscript_builder.pl
brugia_GG4389|c1_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG6320|c8_g2_i1Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:000007812.6545From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
13.3349From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
14.7365From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
15.2434From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
23.9664From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
28.7103From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
35.4655From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
WBls:000008018.4764From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
19.4276From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
19.9604From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
20.9082From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
WBls:0000081 (23)
WBls:000008216.4357From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
17.1214From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
18.0367From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
29.8659From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
33.2435From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
WBls:0000083 (80)
WBls:000009226.529From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
27.7925From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009442.5871From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
42.8706From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000009712.6974From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
18.1564From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
21.7483From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
23.9184From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
3.2e-05From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
5.00637From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
WBls:000066248.8456From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
63.858From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066371.6621From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Methodcurated