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WormBase Tree Display for CDS: Bm4697a

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Name Class

Bm4697aEvidenceCurator_confirmedWBPerson615
WBPerson4055
SMapS_parentSequenceBm_v4_Chr4_scaffold_001
StructureSource_exons (25)
DB_infoDatabaseKEGGKEGG_id2.7.11.1
TrEMBLUniProtAccA0A0K0JFS8
UniProtUniProtAccA0A0K0JFS8
AlphaFoldentryA0A0K0JFS8
Protein_idBm_v4_Chr4_scaffold_001CTP809631
DB_remarkBMA-PAR-1 protein; contains similarity to Pfam domains PF00069 (Protein kinase domain), PF02149 (Kinase associated domain 1); contains similarity to Interpro domains IPR001772 (Kinase associated domain 1 (KA1)), IPR011009 (Protein kinase-like domain superfamily), IPR028375 (KA1 domain/Ssp2, C-terminal), IPR000719 (Protein kinase domain)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byRATT
Prediction_statusConfirmed
IsoformInferred_automaticallyxace
VisibleGeneWBGene00224958
Corresponding_transcriptBm4697a.1
Corresponding_proteinBM45682
Matching_cDNABU917740Inferred_automaticallytranscript_builder.pl
brugia_GG4017|c30_g1_i3Inferred_automaticallytranscript_builder.pl
brugia_GG4017|c26_g1_i2Inferred_automaticallytranscript_builder.pl
brugia_GG4017|c30_g1_i4Inferred_automaticallytranscript_builder.pl
brugia_GG4017|c30_g1_i10Inferred_automaticallytranscript_builder.pl
brugia_GG4017|c26_g1_i3Inferred_automaticallytranscript_builder.pl
brugia_GG4017|c30_g1_i7Inferred_automaticallytranscript_builder.pl
BU917558Inferred_automaticallytranscript_builder.pl
brugia_GG4017|c30_g1_i8Inferred_automaticallytranscript_builder.pl
Brief_identificationKinase associated domain 1 family proteinAccession_evidenceTIGRBm1_29695
RNASeq_FPKMWBls:000007811.7889From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
15.6885From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
16.7963From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
22.9893From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
24.4472From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
33.3342From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
37.2786From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
WBls:000008034.6017From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
35.4183From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
36.0216From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
41.1886From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (23)
WBls:000008233.4381From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
33.5653From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
33.6098From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
34.2803From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
42.1384From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
WBls:0000083 (80)
WBls:000009229.6481From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
30.2461From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009458.1287From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
63.9332From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:00000970.536882From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
16.647From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
18.9945From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
21.2974From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
27.8072From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
30.1984From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
WBls:000066216.1209From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
22.8853From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066347.4222From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Last_reviewed05 Jul 2018 10:54:44WBPerson4055
Remark[20120924 js] this isoform is based on RNASeq dataCurator_confirmedWBPerson615
[180705 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated