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WormBase Tree Display for CDS: Bm4566a

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Name Class

Bm4566aEvidenceCurator_confirmedWBPerson4055
Inferred_automaticallymake_isoforms.pl
SMapS_parentSequenceBm_v4_Chr4_scaffold_001
StructureSource_exons1198
370536
8541043
13881641
20522199
25912874
30703286
DB_infoDB_remarkBMA-CCZ-1 protein; contains similarity to Pfam domains PF19031 (First Longin domain of INTU, CCZ1 and HPS4), PF19032 (Intu longin-like domain 2), PF19033 (Intu longin-like domain 3); contains similarity to Interpro domains IPR043987 (CCZ1/INTU/HSP4, first Longin domain), IPR043989 (CCZ1/INTU/HPS4, third Longin domain), IPR013176 (Vacuolar fusion protein Ccz1), IPR043988 (CCZ1/INTU, second Longin domain)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byaugustus
Prediction_statusConfirmed
IsoformCurator_confirmedWBPerson4055
VisibleGeneWBGene00224827
Corresponding_transcriptBm4566a.1
Corresponding_proteinBM01149
Matching_cDNAbrugia_GG5928|c0_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG5928|c0_g2_i2Inferred_automaticallytranscript_builder.pl
AI096176Inferred_automaticallytranscript_builder.pl
IsoSeq_brugia_PB_4474_1Inferred_automaticallytranscript_builder.pl
Brief_identificationMGC68831 protein, putativeAccession_evidenceTIGRBm1_22635
RNASeq_FPKMWBls:000007816.0575From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
19.3407From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
20.9476From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
21.3099From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
21.4938From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
23.5519From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
24.7216From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
WBls:000008029.3545From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
38.1235From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
44.0601From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
44.5075From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (23)
WBls:000008210.8038From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
11.6212From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
28.977From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
33.3498From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
9.33218From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
WBls:0000083 (80)
WBls:000009249.2821From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
51.2638From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:00000947.54982From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
9.89895From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
WBls:000009723.5476From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
28.8364From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
38.9559From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
40.8656From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
41.5261From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
44.8104From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
WBls:000066222.8511From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
30.131From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:00006636.72978From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Last_reviewed10 May 2019 16:24:35WBPerson4055
Methodcurated