WormBase Tree Display for CDS: Bm3869d

Bm3869d Evidence: Curator_confirmed: WBPerson4055
  SMap: S_parent: Sequence: Bm_v4_Chr4_scaffold_001
  Structure: Source_exons: 1 84
      291 539
      654 811
      1104 1237
      1774 1871
      2308 2371
      2534 2633
      2691 2883
      3058 3182
      3349 3352
  DB_info: DB_remark: contains similarity to Pfam domain PF00001 (7 transmembrane receptor (rhodopsin family)); contains similarity to Interpro domain IPR000276 (G protein-coupled receptor, rhodopsin-like)
  Origin: From_laboratory: HX
    Species: Brugia malayi
  Properties: Coding: CDS
      Prediction_status: Partially_confirmed
    Isoform: Curator_confirmed: WBPerson4055
  Visible: Gene: WBGene00224130
    Corresponding_transcript: Bm3869d.1
    Corresponding_protein: BM48676
    RNASeq_FPKM: WBls:0000078 0.000275 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
        0.100027 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
        0.168579 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
            RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
        1.8e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
        7.2e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
      WBls:0000080 0.000453 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
        0.638477 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
        3.1e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
      WBls:0000081 (19)
      WBls:0000082 0.00028 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
        0.001691 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
        0.099569 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
        1.1e-05 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
      WBls:0000083 (56)
      WBls:0000092 1.40792 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
        1.43303 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
      WBls:0000094 0.000157 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
        0.000526 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
      WBls:0000097 0.023225 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
        0.356103 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
        9e-06 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
      WBls:0000662 0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
            RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
      WBls:0000663 0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
    Last_reviewed: 09 May 2019 15:21:46 WBPerson4055
    Remark: [190509 mh6] This structure has been created based on the RNASeq data. Curator_confirmed: WBPerson4055
        From_analysis: RNASeq
  Method: curated