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WormBase Tree Display for CDS: Bm3699a

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Name Class

Bm3699aEvidenceCurator_confirmedWBPerson1983
SMapS_parentSequenceBm_v4_Chr4_scaffold_001
StructureSource_exons155
708839
10851203
15191630
17181894
20482199
24422576
33513473
DB_infoDatabaseKEGGKEGG_id3.1.3.16
TrEMBLUniProtAccA0A0J9XZA1
UniProtUniProtAccA0A0J9XZA1
AlphaFoldentryA0A0J9XZA1
UniProt_GCRPUniProtAccA0A0J9XZA1
Protein_idBm_v4_Chr4_scaffold_001CDP988971
DB_remarkBMA-GSP-1 protein; contains similarity to Pfam domains PF00149 (Calcineurin-like phosphoesterase), PF16891 (Serine-threonine protein phosphatase N-terminal domain); contains similarity to Interpro domains IPR029052 (Metallo-dependent phosphatase-like), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type), IPR031675 (Serine-threonine protein phosphatase, N-terminal), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byRATT
Prediction_statusConfirmed
IsoformInferred_automaticallyxace
VisibleGeneWBGene00223960
Corresponding_transcriptBm3699a.1
Corresponding_proteinBM06952
Matching_cDNAbrugia_GG5920|c15_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG5920|c15_g1_i6Inferred_automaticallytranscript_builder.pl
brugia_GG5920|c15_g1_i7Inferred_automaticallytranscript_builder.pl
Brief_identificationT-cell receptor beta chain ANA 11, putativeAccession_evidenceTIGRBm1_14085
RNASeq_FPKMWBls:000007816.8817From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
24.5833From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
50.2847From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
50.3203From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
588.397From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
669.41From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
673.097From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
WBls:0000080166.343From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
179.67From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
247.733From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
264.695From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
WBls:0000081 (23)
WBls:0000082138.574From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
140.078From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
150.947From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
175.962From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
176.163From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
WBls:0000083 (80)
WBls:0000092234.663From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
237.362From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:0000094276.45From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
325.346From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:0000097125.558From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
130.269From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
156.578From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
173.019From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
179.318From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
235.875From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
WBls:0000662202.077From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
235.092From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:0000663941.661From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Methodcurated